Jundishapur Journal of Microbiology

Published by: Kowsar

Novel Approaches of Genomic DNA Isolation for Identification of Cultivable Bacteria

Pavan Kumar Pindi 1 , * , Rebba Raja Srinath 1 and Athinarapu Shiva Shanker 1
Authors Information
1 Department of Microbiology, Palamuru University, Andhra Pradesh, India
Article information
  • Jundishapur Journal of Microbiology: December 01, 2013, 6 (10); e8339
  • Published Online: December 1, 2013
  • Article Type: Research Article
  • Received: October 22, 2012
  • Revised: March 12, 2013
  • Accepted: April 23, 2013
  • DOI: 10.5812/jjm.8339

To Cite: Pindi P K, Srinath R R, Shiva Shanker A. Novel Approaches of Genomic DNA Isolation for Identification of Cultivable Bacteria, Jundishapur J Microbiol. 2013 ; 6(10):e8339. doi: 10.5812/jjm.8339.

Abstract
Copyright © 2013, Ahvaz Jundishapur University of Medical Sciences. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/) which permits copy and redistribute the material just in noncommercial usages, provided the original work is properly cited.
1. Background
2. Objectives
3. Materials and Methods
4. Results
5. Discussion
Acknowledgements
Footnotes
References
  • 1. Millar BC, Xu J, Moore JE. Molecular diagnostics of medically important bacterial infections. Curr Issues Mol Biol. 2007; 9(1): 21-39[PubMed]
  • 2. Dixit Usha, Shanker Rishi. Detection of water-borne pathogens: culture plate to genomics. Indian J Sci Technol. 2009; 2(11): 59-71
  • 3. Debast SB, Meis JF, Melchers WJ, Hoogkamp-Korstanje JA, Voss A. Use of interrepeat PCR fingerprinting to investigate an Acinetobacter baumannii outbreak in an intensive care unit. Scand J Infect Dis. 1996; 28(6): 577-81[PubMed]
  • 4. Kalia A, Rattan A, Chopra P. A method for extraction of high-quality and high-quantity genomic DNA generally applicable to pathogenic bacteria. Anal Biochem. 1999; 275(1): 1-5[DOI][PubMed]
  • 5. Fournier PE, Richet H. The epidemiology and control of Acinetobacter baumannii in health care facilities. Clin Infect Dis. 2006; 42(5): 692-9[DOI][PubMed]
  • 6. Ansari IA, Datta AK. An overview of sterilization methods for packaging materials used in aseptic packaging systems. Food Bioprod Process. 2003; 81(1): 57-65
  • 7. Maris P. Modes of action of disinfectants. Revue scientifique et technique (International Office of Epizootics). 1995; 14(1): 47-55
  • 8. Silveira MG, Baumgartner M, Rombouts FM, Abee T. Effect of adaptation to ethanol on cytoplasmic and membrane protein profiles of Oenococcus oeni. Appl Environ Microbiol. 2004; 70(5): 2748-55[PubMed]
  • 9. Sharifa AA, Neoh YL, Iswadi MI, Khairul O, Abdul Halim M, Jamaludin M, et al. Effects of methanol, ethanol and aqueous extract of Plantago major on gram positive bacteria, gram negative bacteria and yeast. Ann Microsc. 2008; 8
  • 10. Moore ERB, Arnscheidt ANGELIKA, Krüger A, Strömpl C, Mau MARGIT. Simplified protocols for the preparation of genomic DNA from bacterial cultures. Mol Microb Ecology Manual. 1999; 1(1): 1-15
  • 11. Xiao Xiao, Zhang Jingling, Zhang Quanyi, Wang Li, Tan Yafang, Guo Zhaobiao, et al. Two methods for extraction of high-purity genomic DNA from mucoid Gram-negative bacteria. Afr J Microbiol Res. 2011; 5(23): 4013-4018
  • 12. Cheng HR, Jiang N. Extremely rapid extraction of DNA from bacteria and yeasts. Biotechnol Lett. 2006; 28(1): 55-9[DOI][PubMed]
  • 13. Kulinski MD, Mahalanabis M, Gillers S, Zhang JY, Singh S, Klapperich CM. Sample preparation module for bacterial lysis and isolation of DNA from human urine. Biomed Microdevices. 2009; 11(3): 671-8[DOI][PubMed]
  • 14. Mirnejad Reza, Babavalian Hamid, Moghaddam Mehrdad Moosazadeh, Khodi Samaneh, Shakeri Fatemeh. Rapid DNA extraction of bacterial genome using laundry detergents and assessment of the efficiency of DNA in downstream process using polymerase chain reaction. Afr J Biotechnol. 2012; 11(1): 173-178
Creative Commons License Except where otherwise noted, this work is licensed under Creative Commons Attribution Non Commercial 4.0 International License .

Search Relations:

Author(s):

Article(s):

Create Citiation Alert
via Google Reader

Readers' Comments